Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs12759392 | chr1:95266075 | T/C | 0.00017 | 212 | 16.5 | 14.83 | 11.43 | KM Plot |
| KIRP | rs12761143 | chr10:102044798 | C/T | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs12761157 | chr10:63463283 | T/A | 0 | 214 | 18.02 | 6.83 | 2.8 | KM Plot |
| KIRP | rs12761488 | chr10:63518232 | G/T | 0 | 213 | 17.57 | 10.3 | 3.38 | KM Plot |
| KIRP | rs12761509 | chr10:109072456 | G/T | 4.9E-5 | 208 | 16.43 | 18.25 | 7.3 | KM Plot |
| KIRP | rs12761889 | chr10:63435703 | G/A | 7.18E-5 | 213 | 17.02 | 12.13 | 7.85 | KM Plot |
| KIRP | rs12762615 | chr10:63362866 | A/G | 0 | 214 | 18.25 | 10.23 | 1.17 | KM Plot |
| KIRP | rs12763641 | chr10:63467483 | G/A | 0 | 213 | 18.02 | 6.83 | 3.38 | KM Plot |
| KIRP | rs12765052 | chr10:102048979 | G/T | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs12765373 | chr10:63432048 | T/A | 0 | 210 | 18.02 | 9 | 1.17 | KM Plot |
| KIRP | rs12766155 | chr10:63427160 | C/T | 0 | 211 | 18.03 | 9 | 1.17 | KM Plot |
| KIRP | rs12767134 | chr10:70724533 | C/A | 8.57E-9 | 213 | 14.87 | 18.03 | 9.77 | KM Plot |
| KIRP | rs12768900 | chr10:63399490 | G/C | 0 | 213 | 18.25 | 8.07 | 1.17 | KM Plot |
| KIRP | rs12769086 | chr10:70712370 | A/G | 8.07E-9 | 213 | 15.07 | 16.97 | 10.6 | KM Plot |
| KIRP | rs12771450 | chr10:63470371 | A/G | 0 | 214 | 3.38 | 6.83 | 18.03 | KM Plot |